Differential gene expression data with significant genes found in Deladenus siricidicola
File 1: Contains StringTie data that have transcripts for each gene identified in the parasitic samples of Deladenus siricidicola, these were aligned using RNA-seq data.
File 2: Contains the featurecounts data used for differential gene expression analysis.
File 3: Contains all the raw RNA sequencing information for all the samples submitted.
File 4: The MultiCQ report with the HISAT2 data that shows all the sequenced samples and their percentage alignment to the D. siricidicola genome.
File 5: Data containing all the downregulated genes identified from the volcano plot analysis.
File 6: Data containing all the upregulated genes identified from the volcano plot analysis.
File 7: Data from the raw Principal Component Analysis (PCA).
File 8: Significant genes identified from differential gene expression analysis with their corresponding p values.
File 9: Transcripts per kilobase million (TPM) data from expression analysis.
File 10: Significant Z scores for the differentially expressed data.
Funding
Tree Protection Cooperative Programme (TPCP)
Centre of Excellence in Plant Health Biotechnology (CPHB)
History
Department/Unit
Biochemistry, Genetics and MicrobiologySustainable Development Goals
- 15 Life on Land