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Identifying number of necrosis and ethylene-inducing peptide 1-like proteins (NLPs) encoding genes from Phytophthora cinnamomi transcriptome
The data provided consists of all raw data files used in compiling the dissertation titled "Identification and molecular characterisation of the necrosis and ethylene-inducing peptide 1-like proteins (NLPs) of Phytophthora cinnamomi." These files consist of a phylogenetic tree file used to represent the relationships between the NLPs identified in this study compared to know published sequences. The Hidden-Markov Model created to identify NLP transcripts from the P. cinnamomi genome. The raw data used to create all heat maps in this study including the expression of the NLP genes as well as the ethylene biosynthesis genes of avocado. Finally, the coding sequences of all candidate NLPs confirmed in this study are also included.
Funding
Hans Merensky Chair in Avocado Research
History
Department/Unit
Biochemistry, Genetics and MicrobiologySustainable Development Goals
- 15 Life on Land
- 1 No Poverty