<div>Supplementary files for the thesis titled "Management of African cereal crop pathogens in the postgenomic era" and "Distinct selective sweep events in differentiated populations of <em>Cercospora zeina</em> in Africa". SNP data and genome annotations used in the thesis chapter "Population genomic analyses suggest recent dispersal of the pathogen <em>Cercospora zeina </em>into East and Southern African maize cropping systems". Genome data of the strains and the reference genome assembly are available on GenBank under the respective accessions PRJNA932176 and MVDW02000000.</div>