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Paecilomyces lignorum : Phylogenetic and Phylogenomic review

Version 2 2024-05-21, 09:56
Version 1 2024-05-20, 14:29
journal contribution
posted on 2024-05-21, 09:56 authored by Cobus VisagieCobus Visagie, Tuan Duong
<p dir="ltr">During a survey of fungi on electricity utility poles in South Africa, a diverse range of fungi were discovered. <i>Paecilomyces</i> was frequently isolated, with five species identified using ITS and β-tubulin (<i>BenA</i>) sequences. These were <i>P. brunneolus</i>, <i>P. dactylethromorphus</i>, <i>P. lecythidis</i>, <i>P. paravariotii</i> and a potential new species. The genomes of 31 of these strains were subsequently sequenced and used in a phylogenomic analysis with 45 previously published genomes of the genus. Phylogenetic analyses were also conducted using ITS, <i>BenA</i>, calmodulin (<i>CaM</i>), RNA polymerase II second largest subunit (<i>RPB2</i>), RNA polymerase II largest subunit (<i>RPB1</i>), the genes coding for the theta subunit of the TCP-1 chaperonin complex (<i>Cct8</i>), and for a putative ribosome biogenesis protein (<i>Tsr1</i>). Both phylogenomic and phylogenetic analyses supported the 15 <i>Paecilomyces</i> species currently accepted and confirmed the novelty of the new species. The latter is the sister species of <i>P. brunneolus</i> and belongs to a clade also containing <i>P. variotii </i>and <i>P. paravariotii</i>. Morphologically, the new species produces longer ellipsoidal conidia and grows more restricted on malt extract agar at 30 °C compared to its closest relatives</p>

Funding

Hexagon Bio

Horizon 2020 Research and Innovation Program (RISE) under the Marie Skłodowska-Curie (Mycobiomics), Grant No: 101008129

Tree Protection Co-operative Programme (TPCP)

National Research Foundation (NRF)

THRIP initiative of the Department of Trade and Industry (DTI)

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Forestry and Agricultural Biotechnology Institute

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  • 15 Life on Land

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